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Pumpkin Whoopie Pies Recipe

If you’re dreaming of a cozy fall treat that feels like a warm hug, you’ll absolutely adore this Pumpkin Whoopie Pies Recipe. These soft, pillowy pumpkin cookies sandwiched with a luscious cream cheese filling are my go-to fall indulgence—and I promise, once you try them, they’ll become a favorite in your household too. Whether you’re baking for a crowd or just craving a personal sweet bite, this recipe is easy to follow and yields a seriously delicious result every time.

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Why You’ll Love This Recipe

  • Perfect Fall Flavors: The warm spices and rich pumpkin combine to create that signature autumn taste we all crave.
  • Soft, Moist, and Pillowy Texture: Unlike dense cookies, these whoopie pies have a light, tender crumb that’s just begging to be filled.
  • Cream Cheese Filling Magic: A creamy, tangy filling balances the sweetness and adds a luscious finish you’ll want to double.
  • Make Ahead Friendly: You can bake in advance and assemble before serving, perfect for holiday prep or busy schedules.

Ingredients You’ll Need

The beauty of this Pumpkin Whoopie Pies Recipe is in how easily these simple pantry staples come together to create something extraordinary. I always suggest using a good-quality pumpkin puree and fresh spices for maximum flavor. Here’s what you’ll want to have on hand:

Flat lay of bright orange pumpkin puree in a small glass jar, a mound of soft light brown sugar crystals, golden vegetable oil in a clear bottle, two fresh brown eggs, a heap of pale all-purpose flour, a small pile of warm brown ground cinnamon and ginger powders, smooth white cream cheese block, a swirl of creamy butter, and a dusting of fine white confectioners’ sugar, beautifully arranged with natural light and soft shadows, placed on a white marble surface, photo taken with an iphone --ar 2:3 --v 7 - Pumpkin Whoopie Pies, Pumpkin Whoopie Pies Recipe, Fall Pumpkin Cookies, Pumpkin Dessert Ideas, Easy Pumpkin Treats
  • All-purpose flour: The base for the cookies; measuring accurately is key for a light texture.
  • Baking soda & baking powder: These leaveners make the cookies rise perfectly fluffy.
  • Salt: Enhances all the flavors and balances the sweetness.
  • Ground ginger, cinnamon, and cloves: Traditional pumpkin spice blend that infuses the cookies with warm, cozy notes.
  • Pumpkin puree: Use canned 100% pumpkin puree (Libby’s is my favorite for thickness and flavor).
  • Light brown sugar: Adds moisture and caramel-like depth; make sure it’s soft!
  • Vegetable oil: Keeps the cookies moist and tender.
  • Eggs: They bind everything and add richness; room temperature eggs mix in better.
  • Vanilla extract: A little magic that rounds out flavors beautifully.
  • Unsalted butter & cream cheese: For that dreamy filling with silky texture and tang.
  • Confectioners’ sugar: Sweetens and thickens the filling to the right creamy consistency.
Note: You’ll find the complete list of ingredients, along with their exact measurements, in the printable recipe card at the bottom of this post.

Variations

I love that you can easily tweak this Pumpkin Whoopie Pies Recipe to suit your tastes or dietary needs. Here are some of my favorite ways to switch things up—feel free to make it your own!

  • Gluten-Free Version: I’ve swapped a 1:1 gluten-free flour blend here with fantastic results—just be sure it includes xanthan gum for structure.
  • Spice It Up: For extra warmth, I add a pinch of nutmeg or Moroccan spice blend—gives the whoopies a pleasantly unique twist.
  • Maple Cream Filling: Sometimes I replace half the confectioners’ sugar with maple syrup and it pairs beautifully with pumpkin.
  • Mini Whoopie Pies: Smaller scoops make adorable bite-size treats perfect for parties or lunchboxes.

How to Make Pumpkin Whoopie Pies Recipe

Step 1: Mix Your Dry Ingredients with Care

Start by whisking together the flour, baking soda, baking powder, salt, and the fragrant spices—ginger, cinnamon, and cloves—in a large bowl. This step is key because it evenly distributes those spices and leavening agents so every bite tastes balanced and the cookies rise just right. I love doing this first while I’m warming up the oven to 350°F; it gets me in the rhythm of baking, you know?

Step 2: Combine Wet Ingredients until Smooth

In a separate bowl, whisk your pumpkin puree, packed brown sugar, vegetable oil, eggs, and vanilla extract until everything is well combined and silky. I recommend bringing your eggs to room temperature first—it helps blend everything together seamlessly for a consistent batter. This mix smells heavenly and trusts me, you’ll be tempted to sneak a taste!

Step 3: Gently Combine Wet and Dry Mixtures

Pour the wet mixture into the dry ingredients and gently stir with a spatula until just combined. You want to be careful here—you don’t want to overmix or you’ll end up with dense cookies. Look for no dry streaks of flour, but it’s okay if the batter is a bit lumpy. This is exactly what you want!

Step 4: Scoop and Bake

I prefer using a small ice cream scoop—about two tablespoons—to dollop uniform cookie mounds onto parchment-lined baking sheets. Make sure they’re spaced about an inch apart because they won’t spread much. Pop one pan at a time into the oven for 12 to 15 minutes. You’ll know they’re ready when the center looks set and a toothpick comes out clean. Let them cool on the pan for 5 minutes before moving to a rack to cool completely. Patience here pays off because warm cookies won’t play nicely with the filling!

Step 5: Whip Up That Cream Cheese Filling

In your mixer, beat softened butter, cream cheese, and vanilla on medium-low speed until smooth, about a minute. Gradually add in confectioners’ sugar and increase speed until the filling is fluffy and luscious. This filling is the real star—I’ve found that beating it adequately but not overdoing it gives the best airy texture.

Step 6: Assemble Your Whoopie Pies

Pipe or spread a generous dollop of filling on the flat side of half the cookies, then gently press a matching cookie on top to create your sandwich. I chill them for about 30 minutes afterward—that step helps the filling set and makes for easier, less messy eating. If you assemble while the cookies are warm, the filling softens and makes a sticky mess, so don’t rush it!

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Pro Tips for Making Pumpkin Whoopie Pies Recipe

  • Measure Flour Accurately: I always recommend weighing flour for this recipe to avoid dense cookies—fluff and spoon if you must use a measuring cup instead.
  • Room Temperature Eggs: Bringing eggs to room temp helps them incorporate better, making the batter smooth and the texture tender.
  • Chill Assembled Pies: Letting the filled whoopie pies chill solidifies the filling and makes them easier to handle and taste better.
  • Use a Cookie Scoop: For uniform size and bake time, this tool is a game changer. I avoid uneven cookies that don’t pair well.

How to Serve Pumpkin Whoopie Pies Recipe

Pumpkin Whoopie Pies Recipe - Serving

Garnishes

I like to keep it simple with these whoopies, but a light dusting of cinnamon sugar or a sprinkle of finely chopped toasted pecans on top adds a nice touch of crunchy texture and an inviting aroma. If I’m feeling festive, a drizzle of melted white chocolate over the top makes them look like holiday royalty.

Side Dishes

These whoopie pies pair wonderfully with a hot latte or a spiced chai tea. For a party spread, I often serve them alongside slices of pumpkin bread or apple cider donuts to create a cozy autumn dessert board that guests rave about.

Creative Ways to Present

For birthdays or special fall gatherings, I arranged mini whoopie pies on a tiered dessert stand with autumn leaves scattered around for a seasonal vibe. Another fun idea is wrapping each pie in parchment tied with twine for gift giving—everyone loves receiving homemade treats packaged with care!

Make Ahead and Storage

Storing Leftovers

After assembling, I store the whoopie pies covered in an airtight container in the refrigerator for up to a week. They keep their moisture and flavor beautifully. If you need to pause after baking the cookies but before filling, you can refrigerate the cookies separately for a few days without any loss in texture.

Freezing

I’ve frozen both the baked cookies and the assembled whoopie pies with great success. For the best results, freeze cookies flat on a tray, then transfer to a freezer-safe bag. You can also freeze filled pies wrapped tightly in plastic wrap and then foil. Defrost overnight in the fridge before serving.

Reheating

Since these treats are best served chilled, I usually enjoy them straight from the fridge. If you prefer them slightly softer, let them sit at room temperature for 15-20 minutes before eating. Avoid microwaving or reheating, as the filling may melt and change texture.

FAQs

  1. Can I use fresh pumpkin instead of canned for this Pumpkin Whoopie Pies Recipe?

    Absolutely! If you want to use fresh pumpkin, roast and puree it well so it’s smooth and thick like the canned variety. Keep in mind fresh pumpkin can be a bit more watery, so you might need to drain excess moisture or adjust flour slightly to maintain the right batter consistency.

  2. How long do Pumpkin Whoopie Pies last?

    When stored in an airtight container in the refrigerator, whoopie pies will stay fresh and delicious for up to one week. For longer storage, freezing as described above is your best bet to keep that fresh-baked taste.

  3. Can I make the filling dairy-free or vegan?

    Yes! You can substitute dairy butter and cream cheese with their vegan or dairy-free versions. I recommend choosing brands that whip up well to maintain the filling’s fluffy texture. Keep in mind the flavor might vary slightly but it’ll still be delicious!

  4. What if I don’t have a cookie scoop?

    Not a problem! Use two spoons to form evenly sized mounds. The key is making sure cookies are roughly the same size so they pair nicely when you sandwich the filling between them.

  5. Can I bake both cookie sheets at the same time?

    I recommend baking one sheet at a time for even cooking and perfect texture because oven hot spots can sometimes cause uneven bake. If you must bake both, rotate the pans halfway through and keep a close eye on them.

Final Thoughts

This Pumpkin Whoopie Pies Recipe holds a special place in my heart—it’s one of those desserts I turn to when I want something that tastes homemade and comforting but still a little bit special. Once you master these, you’ll find yourself reaching for this recipe every fall (and beyond!) I truly hope you’ll try making these and enjoy every bite as much as my family and I do. Happy baking, friend!

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Pumpkin Whoopie Pies Recipe

5 Stars 4 Stars 3 Stars 2 Stars 1 Star 4.8 from 122 reviews
  • Author: Bertha
  • Prep Time: 10 minutes
  • Cook Time: 12 minutes
  • Total Time: 52 minutes
  • Yield: 18 servings
  • Category: Dessert
  • Method: Baking
  • Cuisine: American
  • Diet: Vegetarian

Description

These Pumpkin Whoopie Pies are soft, spiced pumpkin cookies sandwiched with a creamy, smooth cream cheese frosting. Perfect for fall gatherings, these moist and flavorful treats combine warm spices with the richness of pumpkin for a comforting dessert that’s easy to make and sure to impress.


Ingredients

For the Cookies:

  • 3 cups all-purpose flour (360g)
  • 1 teaspoon baking soda
  • 1 teaspoon baking powder
  • 1 teaspoon salt
  • 2 teaspoons ground ginger
  • 1½ teaspoons ground cinnamon
  • ¼ teaspoon ground cloves
  • 1 (15-ounce/425g) can pumpkin puree (about 2 cups)
  • 2 cups packed light brown sugar (440g)
  • ⅔ cup vegetable oil (160ml)
  • 2 large eggs
  • 1 tablespoon vanilla extract

For the Filling:

  • ½ cup unsalted butter, softened (113g)
  • 4 ounces cream cheese, room temperature (113g)
  • ½ teaspoon vanilla extract
  • 3 cups confectioners’ sugar (360g)


Instructions

  1. Preheat and Prepare: Preheat your oven to 350°F (175°C) and line two baking sheets with parchment paper to prevent sticking.
  2. Mix Dry Ingredients: In a large bowl, whisk together the all-purpose flour, baking soda, baking powder, salt, ground ginger, ground cinnamon, and ground cloves until well combined to evenly distribute the spices.
  3. Mix Wet Ingredients: In a separate bowl, whisk the pumpkin puree, packed light brown sugar, vegetable oil, eggs, and vanilla extract until fully combined and smooth.
  4. Combine Wet and Dry: Pour the wet mixture into the dry ingredients bowl and stir gently until the batter is homogeneous and no dry streaks of flour remain.
  5. Scoop Dough: Using a small ice cream scoop or tablespoon, portion the dough onto the prepared baking sheets, spacing each cookie about 1 inch apart to allow for spreading.
  6. Bake: Bake one sheet at a time for 12 to 15 minutes, or until the centers appear set and a toothpick inserted comes out clean. Remove from the oven and let the cookies cool on the sheets for 5 minutes.
  7. Cool Cookies: Transfer the cookies to a wire rack and allow them to cool completely before assembling to avoid melting the frosting.
  8. Prepare the Filling: In a large bowl or stand mixer fitted with a paddle attachment, beat together softened butter, cream cheese, and vanilla on medium-low speed until smooth, about 1 minute.
  9. Add Sugar: Gradually add the confectioners’ sugar with the mixer on low speed, continuing to beat until fully incorporated. Then increase to medium speed and beat until fluffy, about 30 seconds.
  10. Assemble Whoopie Pies: Pipe or spread the frosting evenly onto the flat side of half of the cooled cookies. Top with the remaining cookies, pressing gently to create sandwiches.
  11. Chill: Chill the assembled whoopie pies in the refrigerator for at least 30 minutes to set the filling before serving.
  12. Store: Store the whoopie pies in an airtight container in the refrigerator for up to one week to maintain freshness.

Notes

  • Make and store the cookies and filling separately if preparing ahead, and assemble just before serving to avoid soggy filling or squished pies.
  • Ensure cookies are completely cooled before assembling to prevent the cream cheese frosting from melting, which can cause a sticky mess.
  • If you don’t have a cookie scoop, try to portion the dough evenly so each pair of cookies matches in size for sandwiching.
  • Adjust scoop size for smaller or larger whoopie pies; baking time may vary accordingly — watch closely while they bake.
  • Use a thick, high-quality canned pumpkin puree like Libby’s for best flavor and texture, avoiding watery or pale alternatives.
  • Use soft, moist light brown sugar to achieve optimal cookie texture; rehydrate hardened brown sugar as needed before use.
  • Measure flour accurately by weight or fluffing the flour before spooning and leveling it to avoid dense cookies.
  • Bring eggs to room temperature before mixing to ensure even incorporation into the batter and better texture.
  • Avoid overmixing the batter to keep cookies tender rather than dense and tough.

Nutrition

  • Serving Size: 1 whoopie pie
  • Calories: 320
  • Sugar: 30g
  • Sodium: 270mg
  • Fat: 15g
  • Saturated Fat: 6g
  • Unsaturated Fat: 7g
  • Trans Fat: 0g
  • Carbohydrates: 44g
  • Fiber: 2g
  • Protein: 3g
  • Cholesterol: 40mg

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